Plastome-wide rearrangements and gene losses in carnivorous droseraceae
dc.contributor.author | Nevill, Paul | |
dc.contributor.author | Howell, K.A. | |
dc.contributor.author | Cross, Adam | |
dc.contributor.author | Williams, A.V. | |
dc.contributor.author | Zhong, X. | |
dc.contributor.author | Tonti-Filippini, J. | |
dc.contributor.author | Boykin, L.M. | |
dc.contributor.author | Dixon, Kingsley | |
dc.contributor.author | Small, I. | |
dc.date.accessioned | 2021-07-19T03:01:26Z | |
dc.date.available | 2021-07-19T03:01:26Z | |
dc.date.issued | 2019 | |
dc.identifier.citation | Nevill, P.G. and Howell, K.A. and Cross, A.T. and Williams, A.V. and Zhong, X. and Tonti-Filippini, J. and Boykin, L.M. et al. 2019. Plastome-wide rearrangements and gene losses in carnivorous droseraceae. Genome Biology and Evolution. 11 (2): pp. 472-485. | |
dc.identifier.uri | http://hdl.handle.net/20.500.11937/84619 | |
dc.identifier.doi | 10.1093/gbe/evz005 | |
dc.description.abstract |
The plastid genomes of four related carnivorous plants (Drosera regia, Drosera erythrorhiza, Aldrovanda vesiculosa, and Dionaea muscipula) were sequenced to examine changes potentially induced by the transition to carnivory. The plastid genomes of the Droseraceae show multiple rearrangements, gene losses, and large expansions or contractions of the inverted repeat. All the ndh genes are lost or nonfunctional, as well as in some of the species, clpP1, ycf1, ycf2 and some tRNA genes. Uniquely, among land plants, the trnK gene has no intron. Carnivory in the Droseraceae coincides with changes in plastid gene content similar to those induced by parasitism and mycoheterotrophy, suggesting parallel changes in chloroplast function due to the similar switch from autotrophy to (mixo-) heterotrophy. A molecular phylogeny of the taxa based on all shared plastid genes indicates that the “snap-traps” of Aldrovanda and Dionaea have a common origin. | |
dc.language | English | |
dc.publisher | OXFORD UNIV PRESS | |
dc.relation.sponsoredby | http://purl.org/au-research/grants/arc/IC150100041 | |
dc.relation.sponsoredby | http://purl.org/au-research/grants/arc/FL140100179 | |
dc.relation.sponsoredby | http://purl.org/au-research/grants/arc/DE120101117 | |
dc.rights.uri | http://creativecommons.org/licenses/by/4.0/ | |
dc.subject | Science & Technology | |
dc.subject | Life Sciences & Biomedicine | |
dc.subject | Evolutionary Biology | |
dc.subject | Genetics & Heredity | |
dc.subject | carnivorous plants | |
dc.subject | chloroplast genome | |
dc.subject | Droseraceae | |
dc.subject | gene loss | |
dc.subject | intron loss | |
dc.subject | COST-BENEFIT MODEL | |
dc.subject | HORIZONTAL TRANSFER | |
dc.subject | TRANSFER-RNA | |
dc.subject | MITOCHONDRIAL GENES | |
dc.subject | READ ALIGNMENT | |
dc.subject | PLANT | |
dc.subject | CHLOROPLAST | |
dc.subject | EVOLUTION | |
dc.subject | GENOME | |
dc.subject | SEQUENCE | |
dc.title | Plastome-wide rearrangements and gene losses in carnivorous droseraceae | |
dc.type | Journal Article | |
dcterms.source.volume | 11 | |
dcterms.source.number | 2 | |
dcterms.source.startPage | 472 | |
dcterms.source.endPage | 485 | |
dcterms.source.issn | 1759-6653 | |
dcterms.source.title | Genome Biology and Evolution | |
dc.date.updated | 2021-07-19T03:01:15Z | |
curtin.department | School of Molecular and Life Sciences (MLS) | |
curtin.accessStatus | Open access | |
curtin.faculty | Faculty of Science and Engineering | |
curtin.contributor.orcid | Nevill, Paul [0000-0001-8238-0534] | |
curtin.contributor.orcid | Cross, Adam [0000-0002-5214-2612] | |
curtin.contributor.orcid | Dixon, Kingsley [0000-0001-5989-2929] | |
curtin.contributor.researcherid | Cross, Adam [F-5450-2012] | |
curtin.contributor.researcherid | Dixon, Kingsley [A-8133-2016] [B-1042-2011] | |
dcterms.source.eissn | 1759-6653 | |
curtin.contributor.scopusauthorid | Nevill, Paul [25630973000] [57218223043] | |
curtin.contributor.scopusauthorid | Cross, Adam [55829876800] | |
curtin.contributor.scopusauthorid | Dixon, Kingsley [35556048900] [55498810700] [57203078005] |