Isolation and characterization of EST-derived microsatellite loci from the fungal wheat pathogen Phaeosphaeria nodorum
MetadataShow full item record
Eleven polymorphic microsatellite loci and one minisatellite locus originating from expressed sequence tag (EST) libraries of Phaeosphaeria (syn. Stagonospora) nodorum were isolated and characterized. The satellite markers were used to genotype isolates from field populations collected in China, North America and South Africa. The number of alleles per locus ranged from two to 15. Genotype diversity ranged from 87.5 to 95.3 and gene diversity from 0.1 to 0.8. The variable levels of polymorphism within and among populations of P. nodorum renders these 12 satellite loci ideal markers for population genetic analysis of P. nodorum.
A copy of this item may be available from Professor Richard Oliver
Showing items related by title, author, creator and subject.
Validation of genome-wide association studies as a tool to identify virulence factors in parastagonospora nodorumGao, Y.; Liu, Z.; Faris, J.; Richards, J.; Brueggeman, R.; Li, X.; Oliver, Richard; McDonald, B.; Friesen, T. (2016)Parastagonospora nodorum is a necrotrophic fungal pathogen causing Septoria nodorum blotch on wheat. We have identified nine necrotrophic effector–host dominant sensitivity gene interactions, and we have cloned three of ...
A genome-wide survey of the secondary metabolite biosynthesis genes in the wheat pathogen Parastagonospora nodorumChooi, Y.; Muria-González, Mariano Jordi; Solomon, P. (2014)The model pathogen Parastagonospora nodorum is a necrotroph and the causal agent of the wheat disease Septoria nodorum blotch (SNB). The sequenced P. nodorum genome has revealed that the fungus harbours a large number of ...
Comprehensive annotation of the Parastagonospora nodorum reference genome using next-generation genomics, transcriptomics and proteogenomicsSyme, Robert; Tan, Kar-Chun; Hane, James; Dodhia, Kejal; Stoll, T.; Hastie, M.; Furuki, Eiko; Ellwood, Simon; Williams, A.; Tan, Y.; Renwick, Alison; Gorman, J.; Oliver, Richard (2016)Parastagonospora nodorum, the causal agent of Septoria nodorum blotch (SNB), is an economically important pathogen of wheat (Triticum spp.), and a model for the study of necrotrophic pathology and genome evolution. The ...