Overview of genomic and bioinformatic resources for Zymoseptoria.
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Zymoseptoria tritici (syn. Mycosphaerella graminicola, Septoria tritici) is a haploid fungus belonging to the class Dothideomycetes. It is the causal agent of septoria leaf blotch – one of the world’s most significant diseases of wheat. Here we review the genomic and bioinformatic resources that have been generated for Z. tritici. These include the whole-genome reference assembly for isolate IPO323, genome resequencing of alternate isolates, mitochondrial genome sequences, transcriptome sequences and expression data, and annotations of gene structure and function. We also highlight important advances in our fundamental knowledge of genome evolution and its effects on adaptation and pathogenicity in Z. tritici that have been facilitated by these resources.
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Evaluation of a Multilocus Indel DNA Region for the Detection of the Wheat Tan Spot Pathogen Pyrenophora tritici-repentisSee, Pao Theen; Moffat, Caroline; Morina, J.; Oliver, Richard (2016)Tan spot or yellow (leaf) spot disease of wheat (Triticum spp.) is caused by Pyrenophora tritici-repentis, a necrotrophic fungal pathogen that is wide-spread throughout the main wheat-growing regions in the world. This ...
Analysis of cytochrome b5 reductase-mediated metabolism in the phytopathogenic fungus Zymoseptoria tritici reveals novel functionalities implicated in virulenceDerbyshire, Mark; Michaelson, L.; Parker, J.; Kelly, S.; Thacker, U.; Powers, S.; Bailey, A.; Hammond-Kosack, K.; Courbot, M.; Rudd, J. (2015)Septoria tritici blotch (STB) caused by the Ascomycete fungus Zymoseptoria tritici is one of the most economically damaging diseases of wheat worldwide. Z. tritici is currently a major target for agricultural fungicides, ...
Comparative genomics of a plant-pathogenic fungus, pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergenceManning, V.; Pandelova, I.; Dhillon, B.; Wilhelm, L.; Goodwin, S.; Berlin, A.; Figueroa, M.; Freitag, M.; Hane, James; Henrissat, B.; Holman, W.; Kodira, C.; Martin, J.; Oliver, Richard; Robbertse, B.; Schackwitz, W.; Schwartz, D.; Spatafora, J.; Turgeon, B.; Yandava, C.; Young, S.; Zhou, S.; Zeng, Q.; Grigoriev, I.; Ma, L.; Ciuffetti, L. (2013)Pyrenophora tritici-repentis is a necrotrophic fungus causal to the disease tan spot of wheat, whose contribution to crop loss has increased significantly during the last few decades. Pathogenicity by this fungus is ...